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Abstract 


Cladosporium is mainly known as a ubiquitous environmental saprobic fungus or plant endophyte, and to date, just a few species have been documented as etiologic agents in vertebrate hosts, including humans. In the present study, 10 new species of the genus were isolated from human and animal clinical specimens from the USA. They are proposed and characterized on the basis of their morphology and a molecular phylogenetic analysis using DNA sequences from three loci (the ITS region of the rDNA, and partial fragments of the translation elongation factor 1-alpha and actin genes). Six of those species belong to the C. cladosporioides species complex, i.e., C. alboflavescens, C. angulosum, C. anthropophilum, C. crousii, C. flavovirens and C. xantochromaticum, three new species belong to the C. herbarum species complex, i.e., C. floccosum, C. subcinereum and C. tuberosum; and one to the C. sphaerospermum species complex, namely, C. succulentum. Differential morphological features of the new taxa are provided together with molecular barcodes to distinguish them from the currently accepted species of the genus.

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Persoonia. 2016 Jun; 36: 281–298.
Published online 2016 May 24. https://doi.org/10.3767/003158516X691951
PMCID: PMC4988372
PMID: 27616793

New species of Cladosporium associated with human and animal infections

Abstract

Cladosporium is mainly known as a ubiquitous environmental saprobic fungus or plant endophyte, and to date, just a few species have been documented as etiologic agents in vertebrate hosts, including humans. In the present study, 10 new species of the genus were isolated from human and animal clinical specimens from the USA. They are proposed and characterized on the basis of their morphology and a molecular phylogenetic analysis using DNA sequences from three loci (the ITS region of the rDNA, and partial fragments of the translation elongation factor 1-alpha and actin genes). Six of those species belong to the C. cladosporioides species complex, i.e., C. alboflavescens, C. angulosum, C. anthropophilum, C. crousii, C. flavovirens and C. xantochromaticum, three new species belong to the C. herbarum species complex, i.e., C. floccosum, C. subcinereum and C. tuberosum; and one to the C. sphaerospermum species complex, namely, C. succulentum. Differential morphological features of the new taxa are provided together with molecular barcodes to distinguish them from the currently accepted species of the genus.

Keywords: Capnodiales, Cladosporiaceae, Dothideomycetes, phylogeny, taxonomy

INTRODUCTION

The genus Cladosporium (Cladosporiaceae, Capnodiales) is a large genus of the Ascomycota. It comprises 189 species, mostly saprobes with a worldwide distribution and isolated from a wide range of substrates (David 1997, Bensch et al. 2012, 2015, Crous et al. 2014). The genus also includes common endophytes, plant pathogens often causing leaf spots or other lesions, as well as hyperparasites of other fungi (Bensch et al. 2012). Certain species are relevant as potential biocontrol agents for plant diseases (Köhl et al. 2015) or, in the food industry, as fruit contaminants causing spoilage in low temperature storage or on cereals such as barley, oat, rye and wheat (Samson et al. 2010, Kulik et al. 2014, Frasz & Miller 2015). The role of cladosporia is not well understood in human pathology. Their small conidia are easily dispersed, making them one of the most common air-borne microorganisms (David 1997, De Hoog et al. 2011). They are among the most important allergenic fungi linked to allergic rhinitis and respiratory arrest in asthmatic patients (Black et al. 2000, Sellart-Altisent et al. 2007). Some species are described as a cause of opportunistic phaeohyphomycosis, including subcutaneous and deep infections in humans and animals (De Hoog et al. 2011, Sandoval-Denis et al. 2015), although, their ubiquitous nature suggests that in some reports they may be mere colonizers.

Species identification in Cladosporium has always relied on the morphology of the conidiogenous apparatus together with data on host ranges (Crous et al. 2007b, Bensch et al. 2012). Traditionally, those dematiaceous fungi showing branched acropetal chains of aseptate to septate conidia were included in Cladosporium, which has made it a large and complex group of fungi difficult to differentiate (Bensch et al. 2012). However, recent phylogenetic studies have helped to clarify the taxonomy of these fungi and demonstrated that most of the well-known morphologically-defined species comprises several phylogenetically cryptic species practically impossible to identify using morphological criteria alone (Braun et al. 2003, 2008; Crous et al. 2007b, Zalar et al. 2007, Schubert et al. 2007, 2009, Bensch et al. 2010, 2012, 2015). In its current circumscription, the genus Cladosporium includes dematiaceous fungi with solitary to fasciculate conidiophores, proliferating mostly sympodially and forming unbranched or branched acropetal conidial chains. However, the most characteristic feature is the presence of a thick refractive to darkened cladosporioid or coronate scar, defined as a raised periclinal rim with a central convex dome (Schubert et al. 2007, Bensch et al. 2012). The sexual morph (previously assigned to the genus Davidiella) is characterised by pseudothecial ascomata, 8-spored obovoid to subcylindrical asci, and hyaline, obovoid to ellipsoid ascospores showing irregular luminar inclusions (Schubert et al. 2007).

In recent years, the survey of unexplored habitats and sources by using molecular techniques has expanded our knowledge of fungal diversity. Similarly, clinical specimens have become an important source of undescribed fungi, including both true pathogens and/or also contaminants/colonizers (Gilgado et al. 2005, Perdomo et al. 2013, Giraldo et al. 2014, Guinea et al. 2015, Sandoval-Denis et al. 2015) that had not been recognizable previously because of their poor morphological differentiation (De Hoog et al. 2015).

In order to assess the real prevalence of Cladosporium in the clinical setting and the spectrum of species associated with clinical samples, we studied a large set of Cladosporium isolates from human and animal clinical origin using both molecular characterisation and phenotypic features (Sandoval-Denis et al. 2015). Surprisingly, we found that nearly 40 % of the isolates could not be assigned to any known species and probably represented new species for the genus. The objective of the present study is therefore to determine the phylogenetic relationships of those previously unidentified isolates by using the criteria currently accepted in the taxonomy of this genus.

MATERIALS AND METHODS

Fungal isolates

A total of 48 isolates from clinical origin and belonging to the genus Cladosporium were included in this study, 35 of which corresponded to putatively undescribed species (Table 1). All the isolates were obtained from human and animal clinical specimens from the United States, submitted to the Fungus Testing Laboratory at the University of Texas Health Science Center at San Antonio (UTHSCSA) from different geographic regions of the country for either identification purposes and/or antifungal susceptibility studies.

Table 1

Isolates and GenBank accession numbers of sequences included in this study.

SpeciesaStrain numberbSubstratecGenBank accession numbers
ITStef1ActA
Cercospora beticolaCBS 116456Beta vulgarisNR_121315AY840494AY840458
Cladosporium acalyphaeCBS 125982TAcalypha australisHM147994HM148235HM148481
Cladosporium aciculareCBS 140488TSyzygium corynanthumKT600411KT600509KT600607
Cladosporium aggregatocicatricatumCBS 140493TCulture contaminantKT600448KT600547KT600645
Cladosporium alboflavescensCBS 140690T = UTHSC DI-13-225 = FMR 13338Animal, BALLN834420LN834516LN834604
Cladosporium allicinumCBS 121.47Food, frozen Phaseolus vulgarisKT600364KT600461KT600560
CBS 121624THordeum vulgareEF679350EF679425EF679502
CBS 160.59Human, sputumKT600366KT600463KT600562
CBS 374.53Centaurea rhapontica = Rhaponticum scariosum subsp. rhaponticumKT600368KT600465KT600564
CPC 16759Alnus glutinosaKT600374KT600471KT600570
UTHSC DI-13-170 = FMR 13295Human, toenailLN834409LN834505LN834593
UTHSC DI-13-173 = FMR 13298Human, lungLN834353LN834449LN834537
Cladosporium alliiCBS 101.81Allium porrumJN906977JN906983JN906996
Cladosporium angulosumCBS 140692T = UTHSC DI-13-235 = FMR 13348Human, BALLN834425LN834521LN834609
CPC 11526Acacia mangiumHM148127HM148371HM148616
CPC 14566Corymbia foelscheanaHM148147HM148391HM148636
CPC 18494Ananas comosusKT600413KT600511KT600609
CPC 18496Ananas comosusKT600414KT600512KT600610
Cladosporium angustiherbarumCBS 140479TPinus ponderosaKT600378KT600475KT600574
Cladosporium angustisporumCBS 125983TAlloxylon wickhamiiHM147995HM148236HM148482
UTHSC DI-13-240 = FMR 13353Human, nailLN834356LN834452LN834540
Cladosporium angustiterminaleCBS 140480TBanksia grandisKT600379KT600476KT600575
Cladosporium antarcticumCBS 690.92TCaloplaca regalisEF679334EF679405EF679484
Cladosporium anthropophilumCBS 117483UnknownHM148007HM148248HM148494
CBS 140685T = UTHSC DI-13-269 = FMR 13382Human, BALLN834437LN834533LN834621
CPC 11122Phytolacca americanaHM148019HM148260HM148506
UTHSC DI-13-168 = FMR 13293Human, BALLN834407LN834503LN834591
UTHSC DI-13-169 = FMR 13294Human, BALLN834408LN834504LN834592
UTHSC DI-13-178 = FMR 13303Animal, abscessLN834410LN834506LN834594
UTHSC DI-13-179 = FMR 13304Human, handLN834411LN834507LN834595
UTHSC DI-13-207 = FMR 13320Human, CSFLN834413LN834509LN834597
UTHSC DI-13-226 = FMR 13339Human, BALLN834421LN834517LN834605
UTHSC DI-13-228 = FMR 13341Human, foot skinLN834423LN834519LN834607
UTHSC DI-13-244 = FMR 13357Human, BALLN834428LN834524LN834612
UTHSC DI-13-246 = FMR 13359Human, BALLN834430LN834526LN834614
UTHSC DI-13-271 = FMR 13384Human, BALLN834439LN834535LN834623
Cladosporium aphidisCBS 132182ETEchium pininanaJN906978JN906984JN906997
Cladosporium arthropodiiCBS 124043ETLeaf lesions of rock lilyJN906979JN906985JN906998
Cladosporium asperulatumCBS 126339Eucalyptus leaf litterHM147997HM148238HM148484
CBS 126340TProtea susannaeHM147998HM148239HM148485
Cladosporium australienseCBS 125984TEucalyptus moluccanaHM147999HM148240HM148486
Cladosporium austroafricanumCBS 140481TLeaf litterKT600381KT600478KT600577
Cladosporium austrohemisphaericumCBS 140482TLagunaria patersonia, black mould on fruit surfaceKT600382KT600479KT600578
Cladosporium basiinflatumCBS 822.84THordeum vulgareHM148000HM148241HM148487
Cladosporium chalastosporioidesCBS 125985TFruiting bodies of T. proteae-arboreae on leaves of Protea arboreaHM148001HM148242HM148488
Cladosporium chubutenseCBS 124457TNeedles of Pinus ponderosaFJ936158FJ936161FJ936165
Cladosporium cladosporioidesCBS 113738Grape budHM148004HM148245HM148491
CBS 112388TIndoor airHM148003HM148244HM148490
CPC 14292Soil, pea fieldHM148046HM148287HM148533
UTHSC DI-13-215 = FMR 13328Human, sputumLN834360LN834456LN834544
Cladosporium colocasiaeCBS 386.64TColocasia antiquorumHM148067HM148310HM148555
CBS 119542Leaf of Colocasia esculantaHM148066HM148309HM148554
Cladosporium colombiaeCBS 274.80BTDead leaf, CortaderiaFJ936159FJ936163FJ936166
Cladosporium crousiiCBS 140686T = UTHSC DI-13-247 = FMR 13360Human, BALLN834431LN834527LN834615
Cladosporium cucumerinumCBS 171.52ETFruit of Cucumis sativusHM148072HM148316HM148561
CBS 173.54Fruit of Cucumis sativusHM148074HM148318HM148563
Cladosporium cycadicolaCPC 17251TLeaves of Cycas mediaKJ869122KJ869236KJ869227
Cladosporium delicatulumCBS 126342Indoor building materialHM148079HM148323HM148568
CBS 126344Leaves of Tilia cordataHM148081HM148325HM148570
Cladosporium dominicanumCBS 119415THypersaline waterDQ780353JN906986EF101368
Cladosporium echinulatumCBS 123191Leaf of Dianthus barbatusJN906980JN906987JN906999
Cladosporium exasperatumCBS 125986TEucalyptus tintinnansHM148090HM148334HM148579
Cladosporium exileCBS 125987TChasmothecia of P. guttata on leaves of Corylus avellanaHM148091HM148335HM148580
Cladosporium flabelliformeCBS 126345TMelaleuca cajuputiHM148092HM148336HM148581
UTHSC DI-13-267 = FMR 13380Human, sputumLN834361LN834457LN834545
Cladosporium flavovirensCBS 140462T = UTHSC DI-13-273 = FMR 13386Human, toenailsLN834440LN834536LN834624
Cladosporium floccosumCBS 140463T = UTHSC DI-13-212 = FMR 13325Human, ethmoid sinusLN834416LN834512LN834600
Cladosporium funiculosumCBS 122128Ficus caricaHM148093HM148337HM148582
CBS 122129TLeaf of Vigna umbellataHM148094HM148338HM148583
UTHSC DI-13-175 = FMR 13300Human, BALLN834362LN834458LN834546
Cladosporium fusiformeCBS 119414THypersaline waterDQ780388JN906988EF101372
Cladosporium gamsianumCBS 125989TStrelitzia sp.HM148095HM148339HM148584
Cladosporium globisporumCBS 812.96TMeat stampHM148096HM148340HM148585
Cladosporium grevilleaeCBS 114271TLeaves of Grevillea sp.JF770450JF770472JF770473
Cladosporium halotoleransCBS 119416THypersaline waterDQ780364JN906989EF101397
UTHSC DI-13-250 = FMR 13363Human, scalpLN834374LN834470LN834558
Cladosporium herbaroidesCBS 121626THypersaline waterEF679357EF679432EF679509
Cladosporium herbarumCBS 121621ETHordeum vulgareEF679363EF679440EF679516
UTHSC DI-13-220 = FMR 13333Human, BALLN834378LN834474LN834562
Cladosporium hillianumCBS 125988TLeaves of Grevillea sp.HM148097HM148341HM148586
Cladosporium inversicolorCBS 143.65Leaf of Tilia sp.HM148100HM148344HM148589
CBS 401.80TLeaf of Triticum aestivumHM148101HM148345HM148590
Cladosporium ipereniaeCBS 140483TPuya sp.KT600394KT600491KT600589
CPC 16855Arctostaphylos pallidaKT600395KT600492KT600590
Cladosporium iranicumCBS 126346TLeaf of Citrus sinensisHM148110HM148354HM148599
Cladosporium iridisCBS 138.40ETLeaf of Iris sp.EF679370EF679447EF679523
Cladosporium langeroniiCBS 189.54NTManDQ780379JN906990EF101357
Cladosporium licheniphilumCBS 125990ETFrom P. orbicularis and Physcia sp. on Acer platanoidesHM148111HM148355HM148600
Cladosporium limoniformeCBS 113737Grape berryKT600396KT600493KT600591
CBS 140484TMusa acuminataKT600397KT600494KT600592
Cladosporium longicatenatumCBS 140485TUnknown plantKT600403KT600500KT600598
Cladosporium longissimumCBS 300.96TSoil along coral reef coastDQ780352EU570259EF101385
Cladosporium lycoperdinumCBS 574.78CAureobasidium caulivorumHM148115HM148359HM148604
CBS 126347From galls of Apiosporina morbosa on Prunus sp.HM148112HM148356HM148601
Cladosporium macrocarpumCBS 121623NTSpinacia oleraceaEF679375EF679453EF679529
UTHSC DI-13-191 = FMR 13316Human, faceLN834379LN834475LN834563
Cladosporium montecillanumCBS 140486TPine needlesKT600406KT600504KT600602
CPC 15605Taraxacum sp.KT600407KT600505KT600603
Cladosporium myrtacearumCBS 126350ETCorymbia foelscheanaHM148117HM148361HM148606
Cladosporium ossifragiCBS 842.91ETNarthecium ossifragumEF679381EF679459EF679535
Cladosporium oxysporumCBS 125991SoilHM148118HM148362HM148607
CBS 126351Indoor airHM148119HM148363HM148608
Cladosporium paracladosporioidesCBS 171.54TUnknownHM148120HM148364HM148609
Cladosporium parapenidielloidesCBS 140487TEucalyptus sp.KT600410KT600508KT600606
Cladosporium penidielloidesCBS 140489TAcacia verticillataKT600412KT600510KT600608
Cladosporium perangustumCBS 125996TCussonia sp.HM148121HM148365HM148610
CBS 126365Chasmothecia of Phyllactinia guttata on leaves of Corylus avellanaHM148123HM148367HM148612
CPC 11663Oncoba spinosaHM148128HM148372HM148617
CPC 11815Chasmothecia of Phyllactinia guttata on leaves of Corylus sp.HM148130HM148374HM148619
CPC 11819Chasmothecia of Phyllactinia guttata on leaves of Corylus sp.HM148131HM148375HM148620
CPC 11821Chasmothecia of Phyllactinia guttata on leaves of Corylus sp.HM148132HM148376HM148621
CPC 11831Chasmothecia of Phyllactinia guttata on leaves of Corylus sp.HM148133HM148377HM148622
CPC 12216Morus rubraHM148135HM148379HM148624
CPC 13727Teratosphaeria maculiformisHM148139HM148383HM148628
CPC 13730Protea caffraHM148140HM148384HM148629
CPC 13774Protea caffraHM148141HM148385HM148630
CPC 13870Teratosphaeria fibrillosaHM148142HM148386HM148631
UTHSC DI-13-208 = FMR 13321Canine, BALLN834380LN834476LN834564
Cladosporium phaenocomaeCBS 128769TLeaf bracts of Phaenocoma proliferaJF499837JF499875JF499881
Cladosporium phleiCBS 358.69ETPhleum pratenseJN906981JN906991JN907000
Cladosporium phyllactiniicolaCBS 126353Chasmothecia of P. guttata on leaves of Corylus avellanaHM148151HM148395HM148640
CBS 126355TChasmothecia of P. guttata on leaves of Corylus avellanaHM148153HM148397HM148642
Cladosporium phyllophilumCBS 125992ETFruits of Prunus cerasusHM148154HM148398HM148643
Cladosporium pini-ponderosaeCBS 124456TPinus ponderosaFJ936160FJ936164FJ936167
Cladosporium pseudiridisCBS 116463TIris sp.EF679383EF679461EF679537
Cladosporium pseudochalastosporioidesCBS 140490TPine needlesKT600415KT600513KT600611
Cladosporium pseudocladosporioidesCBS 667.80Malus sylvestrisHM148165HM148409HM148654
CBS 125993TOutside airHM148158HM148402HM148647
CPC 13683Eucalyptus placitaHM148173HM148417HM148662
CPC 14020WheatHM148185HM148429HM148674
CPC 14295SoilHM148188HM148432HM148677
UTHSC DI-13-165 = FMR 13290Human, arm drainageLN834406LN834502LN834590
UTHSC DI-13-190 = FMR 13315Human, CSFLN834412LN834508LN834596
UTHSC DI-13-210 = FMR 13323Human, skinLN834414LN834510LN834598
Cladosporium pseudocladosporioidesUTHSC DI-13-218 = FMR 13331Human, BALLN834418LN834514LN834602
(cont.)UTHSC DI-13-227 = FMR 13340Human, sputumLN834422LN834518LN834606
UTHSC DI-13-234 = FMR 13347Human, sputumLN834424LN834520LN834608
UTHSC DI-13-238 = FMR 13351Human, legLN834426LN834522LN834610
UTHSC DI-13-241 = FMR 13354Human, footLN834427LN834523LN834611
UTHSC DI-13-245 = FMR 13358Human, toeLN834429LN834525LN834613
UTHSC DI-13-251 = FMR 13364Human, BALLN834432LN834528LN834616
UTHSC DI-13-261 = FMR 13374Human, sputumLN834384LN834480LN834568
UTHSC DI-13-265 = FMR 13378Human, BALLN834435LN834531LN834619
UTHSC DI-13-268 = FMR 13381Human, toenailLN834436LN834532LN834620
UTHSC DI-13-270 = FMR 13383Human, nailLN834438LN834534LN834622
Cladosporium psychrotoleransCBS 119412THypersaline waterDQ780386JN906992EF101365
Cladosporium puyaeCBS 274.80ATPuya goudotianaKT600418KT600516KT600614
Cladosporium ramotenellumCBS 121628THypersaline waterEF679384EF679462EF679538
UTHSC DI-13-166 = FMR 13291Human, nasal tissueLN834385LN834481LN834569
Cladosporium rectoidesCBS 125994TVitis flexuosaHM148193HM148438HM148683
Cladosporium rhusicolaCBS 140492TRhus sp.KT600440KT600539KT600637
Cladosporium ruguloflabelliformeCBS 140494TDiatrapaceae sp. on Aloe sp.KT600458KT600557KT600655
Cladosporium rugulovariansCBS 140495TLeaf sheaths of unidentified PoaceaeKT600459KT600558KT600656
Cladosporium salinaeCBS 119413THypersaline waterDQ780374JN906993EF101390
Cladosporium scabrellumCBS 126358TRuscus hypoglossumHM148195HM148440HM148685
Cladosporium silenesCBS 109082Silene maritimaEF679354EF679429EF679506
Cladosporium sinuosumATCC 11285Unidentified mossKT600441KT600540KT600638
CBS 393.68AirKT600442KT600541KT600639
CBS 121629TFuchsia excorticataEF679386EF679464EF679540
CPC 14000WheatKT600443KT600542KT600640
CPC 15454Crocus sativusKT600444KT600543KT600641
CPC 18365Iris pseudacorusKT600446KT600545KT600643
Cladosporium soldanellaeCBS 132186NTSoldanella alpinaJN906982JN906994JN907001
Cladosporium sphaerospermumCBS 193.54NTHuman, nailDQ780343EU570261EU570269
UTHSC DI-13-237 = FMR 13350Human, BALLN834390LN834486LN834574
Cladosporium spinulosumCBS 119907THypersaline waterEF679388EF679466EF679542
Cladosporium subinflatumCBS 121630THypersaline waterEF679389EF679467EF679543
UTHSC DI-13-189 = FMR 13314Human, toenailLN834391LN834487LN834575
Cladosporium subtilissimumCBS 113754TGrape berryEF679397EF679475EF679551
Cladosporium subuliformeCBS 126500TChamaedorea metallicaHM148196HM148441HM148686
UTHSC DI-13-214 = FMR 13327Human, BALLN834394LN834490LN834578
Cladosporium subcinereumCBS 140465T = UTHSC DI-13-257 = FMR 13370Human, sputumLN834433LN834529LN834617
Cladosporium succulentumCBS 140466T = UTHSC DI-13-262 = FMR 13375Dolphin, bronchusLN834434LN834530LN834618
Cladosporium tenellumCBS 121634THypersaline waterEF679401EF679479EF679555
Cladosporium tenuissimumCBS 125995ETFruits of Lagerstroemia sp.HM148197HM148442HM148687
CPC 10882Gnaphalium affineHM148204HM148449HM148694
CPC 11555Citrus sinensisHM148205HM148450HM148695
CPC 11805Strelitzia spHM148207HM148452HM148697
CPC 12795Musa sp.HM148209HM148454HM148699
CPC 13222Callistemon viminalisHM148210HM148455HM148700
CPC 14250Magnolia sp.HM148211HM148456HM148701
UTHSC DI-13-258 = FMR 13371Human, thorancentesis fluidLN834404LN834500LN834588
Cladosporium tuberosumCBS 140693T = UTHSC DI-13-217 = FMR 13330Human, nasalLN834417LN834513LN834601
UTHSC DI-13-219 = FMR 13332Human, footLN834419LN834515LN834603
Cladosporium variabileCBS 121635ETSpinacia oleraceaEF679402EF679480EF679556
Cladosporium variansCBS 126362TCatalpa bungeiHM148224HM148470HM148715
Cladosporium veloxCBS 119417TBambooDQ780361JN906995EF101388
Cladosporium verrucocladosporioidesCBS 126363TRhus chinensisHM148226HM148472HM148717
Cladosporium versiformeCBS 140491THordeum sp.KT600417KT600515KT600613
Cladosporium xantochromaticumCBS 140691T = UTHSC DI-13-211 = FMR 13324Human, BALLN834415LN834511LN834599
CBS 126364Erythrophleum chlorostachysHM148122HM148366HM148611
CPC 11133Eucalyptus sp.HM148126HM148370HM148615
CPC 11609Musa sp.EF679356EF679431EF679508
CPC 11806Strelitzia sp.HM148129HM148373HM148618
CPC 11856Acacia mangiumHM148134HM148378HM148623
CPC 12792Musa sp.HM148136HM148380HM148625
Cladosporium xylophilumCBS 125997TPicea abiesHM148230HM148476HM148721

a New species described in this study are in bolditalic.

b ATCC, American Type Culture Collection, Manassas, VA, USA; CBS, CBS-KNAW Fungal Biodiversity Centre, Utrecht, the Netherlands; CPC, collection of Pedro Crous at CBS; FMR, Facultat de Medicina, Universitat Rovira i Virgili, Reus, Spain; UTHSC, Fungus Testing Laboratory at the University of Texas Health Science Center, San Antonio, Texas, USA.

c BAL fluid, bronchoalveolar lavage fluid specimen; CSF, cerebrospinal fluid.

T Ex-type strain.

ET Ex-epitype strain.

NT Ex-neotype strain.

Phenotypic studies

Macroscopic cultural characteristics of the isolates were recorded after incubation for 14 d at 25 °C, using oatmeal agar (OA) (30 g of filtered oat flakes, 20 g of agar, water 1 L), potato dextrose agar (PDA: Pronadisa, Spain) and synthetic nutrient-poor agar (SNA; KH2PO4 1 g, KNO3 1 g, MgSO4 × 7H2O 0.5 g, KCl 0.5 g, glucose 0.2 g, sucrose 0.2 g, agar 14 g, water 1 L) with and without pieces of sterilised paper as carbon source. In descriptions, colour notations of the colonies were from Kornerup & Wanscher (1978). Observations and measurements of the microscopic structures were carried out from colonies on SNA after incubation for 7 d at 25 °C, mounted on Shear’s solution (Schubert et al. 2007, Zalar et al. 2007, Crous et al. 2009, Bensch et al. 2012). Photographs were made using a Zeiss Axio Imager M1 light microscope (Zeiss, Oberkochen, Germany) with a mounted DeltaPix Infinity X digital camera using Nomarski differential interference contrast and phase contrast optics. Scanning electron microscope (SEM) micrographs were obtained with a Jeol JSM-6400 apparatus, following the protocols described by Figueras & Guarro (1988). Cardinal temperatures of growth were determined culturing the isolates on PDA for 14 d at temperatures ranging from 15 °C to 35 °C at intervals of 5 °C.

DNA extraction, PCR amplification and sequencing

Total genomic DNA was extracted, amplified and sequenced in a previous work, using protocols described elsewhere (Bensch et al. 2012, Sandoval-Denis et al. 2015). Briefly, the primer pair ITS5/ITS4 (White et al. 1990) was used to amplify a region spanning the internal transcribed spacers 1 and 2 and the 5.8S gene of the rRNA (ITS), and the primer pairs EF-728F/EF-986R and ACT-512F/ACT-783R (Carbone & Kohn 1999) were used to amplify a partial fragment of the translation elongation factor 1-α gene (tef1) and the actin gene (actA), respectively.

Sequences were generated using the same PCR primers at Macrogen Europe (Macrogen Inc. Amsterdam, The Netherlands). Consensus sequences were assembled using SeqMan v. 7.0.0 (DNAStar Lasergene, Madison, WI, USA).

Sequence alignment and phylogenetic analyses

Multiple sequence alignments of each locus were performed with MEGA v. 6.06 (Tamura et al. 2013), using the ClustalW algorithm (Thompson et al. 1994) and refined with MUSCLE (Edgar 2004) or manually if necessary. The alignment included sequences from the clinical isolates complemented with sequences representing all the available ex-types and numerous reference strains of Cladosporium spp. retrieved from GenBank and mainly published by Bensch et al. (2012, 2015). These latter sequences were selected on the basis of sequence similarity with the putative new taxa as determined by BLAST searches on the NCBI database using ITS, tef1 and actA loci (Table 1).

Phylogenetic reconstructions were performed using the maximum-likelihood (ML) and Bayesian Inference (BI) approaches under MEGA v. 6.06 and MrBayes v. 3.2 (Huelsenbeck & Ronquist 2001), respectively. MrModelTest v. 2.3 (Nylander 2004) was used to determine the best nucleotide substitution model for each dataset (SYM+G for ITS and GTR+G+I for tef1 and actA). Sequence alignments generated in this study were deposited in TreeBASE (http://treebase.org).

For the ML analyses, support for the internal branches was assessed by a search of 1 000 bootstrapped sets of data. A bootstrap support (bs) of ≥ 70 % was considered significant. For BI analyses, four Markov chains were performed in two simultaneous runs for 10 000 000 generations with a sampling rate of 1 000 generations. Once checked for the convergence of the runs (average standard deviation of split frequencies parameter below 0.01), the 50 % majority-rule consensus tree and posterior probability values (pp) were calculated after discarding 2 500 trees for burn-in. A pp value ≥ 0.95 was considered significant. Phylogenetic concordance of the ITS, tef1 and actA gene datasets was evaluated with the partition-homogeneity test implemented with PAUP v. 4.0b10 (Swofford 2003) and also by visual comparison of the individual phylogenies in order to assess for any incongruent results between nodes with high statistical support. Taxonomic novelties were deposited in MycoBank (Crous et al. 2004).

RESULTS

Phylogeny

The different partitions were congruent as determined by visual comparison of the individual phylogenies (data not shown) and by the partition homogeneity test (p = 0.16). Phylogenies obtained by ML and BI also showed topological congruence. The final combined analysis of the three mentioned loci datasets encompassed 197 sequences representing 101 taxa, including Cercospora beticola (CBS 116456) as the outgroup, and comprised 1 026 bp (ITS 448 bp, tef1 357 bp and actA 221 bp) from which 546 bp were variable (ITS 108 bp, tef1 291 bp and actA 147 bp) and 399 bp phylogenetically informative (ITS 42 bp, tef1 234 bp and actA 123 bp). Unique site pattern values for the Bayesian analyses were 92, 322 and 167 for ITS, tef1 and actA datasets, respectively (Fig. 1). Of the 35 unidentified isolates, 21 clustered into ten groups that received strong statistical support with the exception of two monotypic lineages (CBS 140465 and CBS 140466), which, however, were genetically and morphologically differentiated from their closest phylogenetic relatives. The remaining 14 isolates were identified here as C. pseudocladosporioides (13 isolates) and C. allicinum (one isolate). The isolates representing putative new taxa grouped mainly in the C. cladosporioides species complex in which 16 isolates were distributed in three terminal clades and three monotypic linages. Five isolates belonged to the C. herbarum species complex, two of them (CBS 140693 and UTHSC DI-13-219) grouped in a terminal clade, located in a basal position to the remaining species of the complex, while three isolates formed monotypic lineages. The C. sphaerospermum species complex included a single unidentified isolate (CBS 140466) forming a genetically and morphologically distinct lineage. The 10 phylogenetic groups are thus considered new species of Cladosporium and are described in the taxonomy section below.

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Maximum likelihood (ML) tree obtained from the combined ITS, tef1 and actA sequences of 196 strains from Cladosporium species. The tree is rooted with Cercospora beticola CBS 116456. Numbers on the branches represent ML bootstrap support values of 70 % and higher, followed by Bayesian posterior probabilities (pp) above 0.94. Fully supported branches are thickened and names of species newly described here are indicated in bold. Coloured blocks represent the species complex affinity of the novelties described here. Branch lengths are proportional to distance.

T Ex-type strain. ET Ex-epitype strain. NT Ex-neotype strain.

TAXONOMY

Cladosporium alboflavescens Sandoval-Denis, Gené & Cano, sp. nov. — MycoBank MB815332; Fig. 2

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Cladosporium alboflavescens CBS 140690. a–c. Colonies on (a) PDA, (b) SNA and (c) OA after 14 d at 25 °C; d–f. conidiophores and conidia. — Scale bars: a–c = 10 mm, d–f = 5 μm.

Etymology. From Latin albus ‘white’ flavus ‘yellow’, referring to the colony colour of the species.

Colonies on OA attaining 20–23 mm diam after 14 d at 25 °C, white to grey-yellow (4A1/C4), flat, velvety, margin regular and with abundant submerged mycelium; reverse olive brown (4D5/F8), without diffusible pigments. On PDA attaining 34–36 mm diam after 14 d at 25 °C, yellow-grey to olive brown (4B2/D4), with prominent light yellow (3A4) exudate, flat or umbonate, folded, margin regular; reverse grey-yellow to olive brown (4B4/F4) to black. On SNA reaching 22–25 mm after 14 d at 25 °C, obverse and reverse olive (3D5/E8), flat, velvety with granular centre, margin undulate and with abundant submerged mycelium. Mycelium superficial and immersed, composed of septate, branched, 2.5–5 μm wide, subhyaline to pale brown, smooth to slightly roughened, thin-walled hyphae. Conidiophores erect, straight, cylindrical, non-nodulose, septate, simple or branched, up to 130 μm long, 2.5–4 μm wide, pale brown, smooth or sparingly verrucose with darkened and refractive scars. Conidiogenous cells terminal or intercalary, cylindrical, geniculate, 7–36 × 2–4 μm, with up to five apical loci of 1.5–2 μm diam, thickened and refractive. Ramoconidia aseptate, subcylindrical to cylindrical, 11–36 × 2–3 μm, pale brown, smooth-walled. Conidia forming branched chains with up to three conidia in the terminal unbranched part, pale brown, sparingly verrucose, with protuberant, somewhat darkened and refractive conidial hila; small terminal conidia aseptate, oval, 5–6.5 × 2–3.5 μm (av. (± SD) 5.9 (± 0.4) × 2.8 (± 0.4)); intercalary conidia aseptate, ellipsoidal to almost cylindrical with attenuated ends, 7–13 × 2.5–3 μm (av. (± SD) 10.6 (± 2.5) × 2.6 (± 0.2)); secondary ramoconidia 0–1-septate, ellipsoidal, 8.5–18 × 2–3 μm (av. (± SD) 14.3 (± 3.3) × 2.6 (± 0.5)).

Cardinal temperature for growth — Optimum 20–25 °C, maximum 30 °C, minimum 15 °C.

Specimen examined. USA, California, from animal bronchoalveolar lavage fluid, Mar. 2009, D.A. Sutton (holotype CBS H-22379, culture ex-type CBS 140690 = UTHSC DI-13-225 = FMR 13338).

Notes — Cladosporium alboflavescens is morphologically similar to C. pini-ponderosae and C. verrucocladosporioides (Schubert et al. 2009, Bensch et al. 2010). However, the new species differs mainly by its pale coloured vegetative structures, and its yellow to pale olive colonies on OA and PDA vs olivaceous grey in the two latter species. The phylogenetically closely related species C. iranicum (Bensch et al. 2010) also shows similar micro-morphological characteristics to C. alboflavescens, but it differs in forming longer conidial chains with up to 10 conidia in the terminal unbranched part and often showing subrostrate intercalary conidia, while conidial chains of the novel species are much shorter and intercalary conidia ellipsoidal to cylindrical being also genetically well differentiated (99.8 %, 87.9 % and 90.1 % sequence similarity for ITS, tef1 and actA, respectively).

Cladosporium angulosum Sandoval-Denis, Deanna A. Sutton & Guarro, sp. nov. — MycoBank MB815333; Fig. 3

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Cladosporium angulosum CBS 140692. a–c. Colonies on (a) PDA, (b) SNA and (c) OA after 14 d at 25 °C; d–f. conidiophores and chains of conidia. — Scale bars: a–c = 10 mm, d–f = 5 μm.

Etymology. From Latin angulosus ‘full of corners’, referring to the shape of the conidiophore.

Colonies on OA reaching 52–55 mm after 14 d at 25 °C, olive brown (4E3/F8), flat, velvety to granular, with regular margin; reverse olive brown (4E3/F8) to black. On PDA attaining 50–56 mm diam after 14 d at 25 °C, olive brown (4F4/F8), with a raised or umbonate centre and radially folded towards the periphery, velvety to dusty or granular, with regular margin; reverse dark green (30F8) to black. On SNA reaching 37–40 mm after 14 d at 25 °C, olive brown (4D4/F6), flat, velvety, with lobulated margin; reverse olive brown (4D4/F6) to black. Mycelium superficial and immersed, composed of septate, branched, 1.5–3 μm wide, pale olivaceous brown, with smooth and thin-walled hyphae. Conidiophores erect, cylindrical, non-nodulose, septate, septa darkened, branched, frequently branching near the base in a 90° angle, up to 150 μm long, 3–4 μm wide, pale brown, smooth and thin-walled. Conidiogenous cells terminal or intercalary, cylindrical, 8–46 × 2–3.5 μm, bearing up to four conidiogenous loci of 1–1.5 μm diam, darkened and refringent. Ramoconidia aseptate, subcylindrical, straight, 24.5–46 × 2–3.5 μm, pale brown, finely roughened, with scars protuberant, thickened and darkened. Conidia forming long branched chains with up to 14 conidia in the terminal unbranched part, pale olivaceous brown, smooth and thin-walled, with protuberant conidial hila, not darkened; small terminal conidia aseptate, obovate to nearly cylindrical, 3.5–4.5 × 2–2.5 μm (av. (± SD) 4.1 (± 0.3) × 2.3 (± 0.3)); intercalary conidia aseptate, ellipsoidal, 4–6 × 2–3 μm (av. (± SD) 5.3 (± 0.6) × 2.4 (± 0.4)); secondary ramoconidia 0–1-septate, usually constricted at septum, subcylindrical, 8–17 × 2.5–3 μm (av. (± SD) 12.2 (± 2.6) × 2.8 (± 0.3)).

Cardinal temperature for growth — Optimum 25 °C, maximum 35 °C, minimum 15 °C.

Specimen examined. USA, Texas, from human bronchoalveolar lavage fluid, Sept. 2008, D.A. Sutton (holotype CBS H-22380, culture ex-type CBS 140692 = UTHSC DI-13-235 = FMR 13348).

Notes — The clade representative of C. angulosum includes several strains previously identified as C. perangustum, a species accepted with a considerable morphological and genetic diversity by Bensch et al. (2010, 2012, 2015). However, it shows a sufficient genetic distance (ITS, 100 %; tef1, 77 %; actA, 85.4 % similarity) with respect to the ex-type strain of C. perangustum to be considered a distinct species. Morphologically, C. angulosum can be mainly differentiated from C. perangustum by its conidiophores, which are usually branched forming a 90° angle, while those of the latter are only occasionally branched. In addition, the new species produces smaller secondary ramoconidia and intercalary conidia (up to 17 μm and 6 μm long, respectively, vs 6–30(–34) μm and 4–16(–19) μm long, respectively, in C. perangustum) (Bensch et al. 2012). Another closely related species is C. xantochromaticum, but it is genetically well differentiated from C. angulosum (99.1 %, 81.1 % and 90.8 % similarity for ITS, tef1 and actA, respectively), and morphologically it has longer conidiogenous cells (up to 32 μm long vs 27 μm long in C. angulosum), smaller ramoconidia (up to 39 μm long vs 46 μm long in C. angulosum) and does not grow at 35 °C.

Cladosporium anthropophilum Sandoval-Denis, Gené & Wiederhold, sp. nov. — MycoBank MB815334, Fig. 4

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Cladosporium anthropophilum CBS 140685. a–c. Colonies on (a) PDA, (b) SNA and (c) OA after 14 d at 25 °C; d–e. conidiophores and chains of conidia; f–g. detail of conidial ornamentation. — Scale bars: a–c = 10 mm; d–e = 5 μm; f–g = 1 μm.

Etymology. From the Greek ánthrōpos (áνθρωποζ) ‘human’ and philos ([var phi]íλοζ) ‘fondness’, referring to the source of the ex-type, human clinical samples.

Colonies on OA attaining 27–32 mm diam after 14 d at 25 °C, olive to olive brown (3F2/4F8), flat, dusty or granular, aerial mycelium scarce, with fimbriate margin; reverse olive brown (4F8) to black, without diffusible pigment. On PDA attaining 17–39 mm diam after 14 d at 25 °C, grey-green to deep green (28D7/D8), flat or folded, velvety to dusty or granular, aerial mycelium scarce, sometimes showing cottony to floccose white to grey cushions, with a regular margin; reverse dark green (28F8) to black. On SNA reaching 23–26 mm after 14 d at 25 °C, olive to olive brown (3F2/4F8), flat, dusty to cottony, aerial mycelium abundant, often with irregular to arachnoid margins; reverse olive to olive brown (3F2/4F8). Mycelium superficial and immersed, composed of septate, branched, 2–3 μm wide, subhyaline to pale green, smooth and thick-walled, anastomosing hyphae. Conidiophores erect, cylindrical, non-nodulose, geniculate, septate, usually branched, up to 550 μm long, 2–5 μm wide, pale green-brown, slightly roughened to verruculose toward the base, with a thickened and refractive wall. Conidiogenous cells terminal and intercalary, cylindrical or subcylindrical, 15–54 × 3–5 μm, often with a swollen apex, bearing 3–8(–10), protuberant, subdenticulate, 1–2.5 μm diam, thickened and somewhat darkened conidiogenous loci. Ramoconidia aseptate, cylindrical, 20–42 × 2–5 μm, pale green, smooth, with conidial scars protuberant, thickened and darkened. Conidia forming short branched chains with up to four conidia in the terminal unbranched part of the chain, aseptate, smooth or finely roughened, reticulate under SEM; small terminal conidia oval to ellipsoidal, 3.5–9 × 2–3 μm (av. (± SD) 5.6 (± 1.2) × 2.5 (± 0.4)), subhyaline; intercalary conidia limoniform to ellipsoidal, 4.5–11 × 2–3 μm (av. (± SD) 6.9 (± 1.8) × 2.7 (± 0.3)), light green-brown; secondary ramoconidia 0–1-septate, ellipsoidal to subcylindrical, usually attenuated at the centre, 7–28 × 2–5 μm (av. (± SD) 13.7 (± 4.8) × 3.4 (± 0.6)).

Cardinal temperature for growth — Optimum 25 °C, maximum 35 °C, minimum 5 °C.

Specimens examined. USA, Minnesota, from human bronchoalveolar lavage fluid, Sept. 2012, D.A. Sutton (holotype CBS H-22381, culture ex-type CBS 140685 = UTHSC DI-13-269 = FMR 13382); from human bronchoalveolar lavage fluid, Sept. 2012, D.A. Sutton, UTHSC DI-13-168 = FMR 13293; California, from a hand, Oct. 2010, D.A. Sutton, UTHSC DI-13-179 = FMR 13304; Florida, from human bronchoalveolar lavage fluid, Jan. 2007, D.A. Sutton, UTHSC DI-13-271 = FMR 13384; from human bronchoalveolar lavage fluid, Mar. 2007, D.A. Sutton, UTHSC DI-13-246 = FMR 13359; from an animal abscess, Jan. 2012, D.A. Sutton, UTHSC DI-13-178 = FMR 13303; Massachusetts, from human bronchoalveolar lavage fluid, Mar. 2012, D.A. Sutton, UTHSC DI-13-169 = FMR 13294; Texas, from human cerebrospinal fluid, Mar. 2009, D.A. Sutton, UTHSC DI-13-207 = FMR 13320; from human bronchoalveolar lavage fluid, Jan. 2009, D.A. Sutton, UTHSC DI-13-226 = FMR 13339; from human foot skin, May 2008, D.A. Sutton, UTHSC DI-13-228 = FMR 13341; from human pleural fluid, Apr. 2008, D.A. Sutton, UTHSC DI-13-244 = FMR 13357.

Notes — Cladosporium anthropophilum is probably a common saprobic fungus, as determined by the number of isolates evaluated, and can also represent a clinically relevant fungus, being the second most prevalent species identified in a set of clinical isolates from the USA after C. halotolerans (Sandoval-Denis et al. 2015). The new taxon is morphologically similar to C. cladosporioides and C. pseudocladosporioides, but phylogenetically distant. Although the three species are difficult to separate morphologically, C. anthropophilum mainly differs by its longer (up to 550 μm) conidiophores and oval to ellipsoidal terminal conidia (3.5–9 μm long) showing a fine reticulation under SEM. The conidiophores of C. cladosporioides and C. pseudocladosporioides are 10–250 μm and 15–155 μm long, respectively, and their terminal conidia are subglobose to limoniform ((3–)4–8(–11) μm long) and with a irregularly reticulate or striped wall in the former, and obovoid to ellipsoidal (3–5.5 μm long) and smooth-walled or almost so in the latter species (De Vries 1952, Bensch et al. 2012). Cladosporium anthropophilum also resembles C. tenuissimum, a species previously described as human opportunistic pathogen (De Hoog et al. 2011). However both are genetically well differentiated (99.3 %, 87.7 % and 89.9 % similarity for ITS, tef1 and actA, respectively) and, morphologically, C. anthropophilum shows longer terminal conidia (3.5–9 μm long (av. (± SD) 5.6 (± 1.2)) vs (2–)2.5–5(–6) μm long (av. (± SD) 3.7 ± 1.0)) in C. tenuissimum) and shorter intercalary conidia (4.5–11 μm long (av. (± SD) 6.9 (± 1.8)) vs 4–12(–17) μm long (av. (± SD) 8.1 (± 2.7)) in C. tenuissimum) (Bensch et al. 2012).

Cladosporium crousii Sandoval-Denis, Cano & Guarro, sp. nov. — MycoBank MB815341; Fig. 5

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Cladosporium crousii CBS 140686. a–c. Colonies on (a) PDA, (b) SNA and (c) OA after 14 d at 25 °C; d–e. conidiophores and chains of conidia; f. conidia. — Scale bars: a–c = 10 mm, d–f = 5 μm.

Etymology. In honour of Pedro W. Crous for his extensive work on Cladosporium.

Colonies on OA attaining 47–50 mm diam after 14 d at 25 °C, olive to dark green (3F8/30F8), flat, velvety to granular, aerial mycelium scarce, margin fimbriate and with abundant submerged mycelia; reverse olive to dark green (3F8/30F8) to black, without diffusible pigment. On PDA attaining 73–77 mm diam after 14 d at 25 °C, olive brown (4E3/E6), radially folded, velvety or granular with floccose centre and regular margin; reverse at first dark brown (7F8) turning black. On SNA reaching 39–41 mm after 14 d at 25 °C, olive brown (4D5/F8), flat, velvety with floccose centre, margin fimbriate and with abundant submerged mycelium; reverse black. Mycelium superficial and immersed, composed of septate, branched, 2.5–3.5 μm wide, subhyaline hyphae, with slightly roughened walls. Conidiophores erect, cylindrical, septate, usually unbranched or sparingly branched, up to 230 μm long, 2–3.5 μm wide, pale green-brown, smooth-walled. Conidiogenous cells terminal and intercalary, cylindrical, sometimes geniculate toward the apex, 11–23 × 2.5–4 μm, bearing 1–4 conidiogenous loci of 1.5–2 μm diam, protuberant, black and refringent. Ramoconidia 0–1-septate, subcylindrical to cylindrical, 19–39 × 2–3 μm, pale brown, smooth. Conidia forming long branched chains with up to seven conidia in the terminal unbranched part of the chain, subhyaline, smooth, with protuberant, thickened and darkened conidial hila; small terminal conidia aseptate, ellipsoidal to subcylindrical, with a central constriction, 7–9 × 2–2.5 μm (av. (± SD) 7.8 (± 0.7) × 2.2 (± 0.2)); intercalary conidia aseptate, ellipsoidal to cylindrical, slightly curved, aseptate, 9–10 × 2–3 μm (av. (± SD) 9.5 (± 0.5) × 2.3 (± 0.4)); secondary ramoconidia 0–1-septate, cylindrical, 9.5–24 × 2.5–3.5 μm (av. (± SD) 15.7 (± 4.4) × 2.8 (± 0.3)).

Cardinal temperature for growth — Optimum 25 °C, maximum 30 °C, minimum 15 °C.

Specimen examined. USA, South Carolina, from human bronchoalveolar lavage fluid, May 2008, D.A. Sutton (holotype CBS H-22385, culture ex-type CBS 140686 = UTSHC DI-13-247 = FMR 13360).

Notes — Cladosporium crousii is closely related to C. gamsianum, but morphologically they are clearly differentiated. The first species is characterised by longer (up to 230 μm long) and pale coloured conidiophores with unthickened walls, and longer ellipsoidal terminal conidia (7–9 μm long). In contrast, C. gamsianum exhibits dark brown and thick-walled conidiophores of 10–146 μm long, and obovoid terminal conidia of 3–6 μm long (Bensch et al. 2010).

Cladosporium flavovirens Sandoval-Denis, Gené & Guarro, sp. nov. — MycoBank MB814508; Fig. 6

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Cladosporium flavovirens CBS 140462. a–c. Colonies on (a) PDA, (b) SNA and (c) OA after 14 d at 25 °C; d, e. conidiophores and chains of conidia; f. conidia. — Scale bars: a–c = 10 mm, d–f = 5 μm.

Etymology. From Latin flavus ‘yellow’ and virens ‘green’, referring to the colony colour on OA.

Colonies on OA attaining 53–55 mm diam after 14 d at 25 °C, olive yellow to olive (2D8/3F8) with olive grey to olive (2F2/E2) patches, flat, velvety to floccose, margin fimbriate and with abundant submerged mycelium; reverse olive yellow to olive (2D8/3F8) to black, without diffusible pigment. On PDA attaining 63–65 mm diam after 14 d at 25 °C, obverse and reverse green-grey to dark green (30F2/F8), flat or umbonate and radially folded, velvety, with regular margin. On SNA reaching from 30–32 mm after 14 d at 25 °C, olive to olive brown (2E8/3E8), flat, velvety to granular, margin slightly irregular and with abundant submerged mycelium; reverse olive yellow (2D8) to black. Mycelium superficial and immersed composed of septate, branched, 2–3 μm wide, subhyaline to pale green-brown, rough- and thick-walled hyphae, with abundant anastomoses. Conidiophores erect, cylindrical, sometimes geniculate, non-nodulose, septate, simple or branched, up to 170 μm long, 4–5 μm wide, medium green-brown, slightly roughened to verruculose, with thick and refractive walls. Conidiogenous cells terminal or intercalary, subcylindrical or cylindrical, 15–54 × 3–5 μm, bearing up to four conidiogenous loci of 1–2 μm diam, darkened and refringent. Ramoconidia 0–1-septate, subcylindrical to cylindrical, often geniculate, 27–75 × 3–4 μm, smooth or finely verruculose. Conidia forming branched chains with up to five conidia in the terminal unbranched part, pale green-brown, smooth- and thick-walled, with protuberant and darkened conidial hila; small terminal conidia aseptate, obovoidal to short ellipsoidal, 5–7 × 2.5–3 μm (av. (± SD) 5.9 (± 0.6) × 2.9 (± 0.2)); intercalary conidia aseptate, ellipsoidal, 7–10 × 3–3.5 μm (av. (± SD) 8.3 (± 0.9) × 3.2 (± 0.2)); secondary ramoconidia 0–2-septate, ellipsoidal to cylindrical, 9–30 × 3.5–4 μm (av. (± SD) 16.2 (± 6.7) × 3.8 (± 0.3)).

Cardinal temperature for growth — Optimum 25 °C, maximum 35 °C, minimum 15 °C.

Specimen examined. USA, Florida, from human toenail, Nov. 2006, D.A. Sutton (holotype CBS H-22326, culture ex-type CBS 140462 = UTHSC DI-13-273 = FMR 13386).

Notes — Cladosporium flavovirens is morphologically and phylogenetically related to C. flabelliforme. However, the new species is genetically well differentiated (99.8 %, 80.9 % and 81.8 % sequence similarity for ITS, tef1 and actA, respectively) and produces somewhat longer secondary ramoconidia (up to 30 μm) which are often septate, in contrast to the aseptate secondary ramoconidia of C. flabelliforme which are up to 27 μm long (Bensch et al. 2012).

Cladosporium floccosum Sandoval-Denis, Cano & Guarro, sp. nov. — MycoBank MB814509; Fig. 7

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Cladosporium floccosum CBS 140463. a–c. Colonies on (a) PDA, (b) SNA and (c) OA after 14 d at 25 °C; d–e. conidiophores and conidia; f. chain of conidia. — Scale bars: a–c = 10 mm, d–f = 5 μm.

Etymology. From Latin floccosus ‘spotted with small tufts’, referring to the macroscopic characteristics of the colony.

Colonies on OA reaching 24–27 mm after 14 d at 25 °C, grey-beige to olive brown (4C1/F4), slightly umbonate and radially folded, velvety to dusty with regular margins; reverse olive brown (4D4/F4), without diffusible pigments. On PDA attaining 47–50 mm diam after 14 d at 25 °C, grey-green to dark green (30E5/F7), flat to umbonate and slightly folded, velvety with white cottony centre and regular margin; reverse olive brown (4D8/E8) with black patches. On SNA reaching 15–20 mm after 14 d at 25 °C, olive brown (4D2/F4), flat, velvety to floccose with abundant grey aerial mycelium, margin lobate and fimbriate with abundant submerged mycelium; reverse olive brown to dull green (4E4/30E4). Mycelium superficial and immersed composed of septate, branched, 1.5–4.5 μm wide, subhyaline to pale brown, verruculose and thin-walled hyphae. Conidiophores erect, flexuous, subcylindrical, distinctly geniculate, septate, mostly unbranched, up to 100 μm long, 4–5 μm wide, pale to medium olivaceous brown, smooth to slightly roughened, with thickened, darkened and refractive walls. Conidiogenous cells terminal, cylindrical, nodulose, 16–24 × 3–5 μm, smooth and thick-walled, bearing up to three conspicuous, refractive, slightly darkened conidiogenous loci of 1.5–2.5 μm diam. Ramoconidia not observed. Conidia forming unbranched chains with up to three conidia, pale brown, echinulate, with protuberant and darkened conidial hila; small terminal conidia 0–1-septate, sometimes slightly constricted at septa, obovoidal to ovoidal, 8–12.5 × 6–8.5 μm (av. (± SD) 10.7 (± 1.8) × 6.8 (± 0.9)); intercalary conidia 0–1-septate, ellipsoidal, 12–15 × 6–8.5 μm (av. (± SD) 13.7 (± 1.0) × 7.5 (± 0.8)); secondary ramoconidia not observed.

Cardinal temperature for growth — Optimum 25 °C, maximum 30 °C, minimum 15 °C.

Specimen examined. USA, Minnesota, from human ethmoid sinus, Sept. 2010, D.A. Sutton (holotype CBS H-22327, culture ex-type CBS 140463 = UTHSC DI-13-212 = FMR 13325).

Notes — Cladosporium floccosum is morphologically similar to C. sinuosum, which is also its closest phylogenetic relative; both species have distinctly geniculate conidiophores and do not form ramoconidia. However, C. floccosum has considerably smaller (up to 100 μm long) and rarely branched conidiophores and slightly shorter terminal conidia (up to 12.5 μm long) respect to those of C. sinuosum, which has conidiophores up to 380 μm long and terminal conidia up to 15 μm long (Schubert et al. 2007, Bensch et al. 2015).

Cladosporium subcinereum Sandoval-Denis, Deanna A. Sutton & Gené, sp. nov. — MycoBank MB814511; Fig. 8

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Cladosporium subcinereum CBS 140465. a–c. Colonies on (a) PDA, (b) SNA and (c) OA after 14 d at 25 °C; d–e. conidiophores and chains of conidia; f–g. detail of conidial ornamentation. — Scale bars: a–c = 10 mm; d–e = 5 μm; f–g = 1 μm.

Etymology. From Latin subcinereus ‘somewhat grey’, referring to the colony colour.

Colonies on OA reaching 29–32 mm after 14 d at 25 °C, yellow-grey to olive grey (3B2/E2), flat, velvety to cottony, with regular margin, abundant crystalline exudates occasionally present; reverse yellow-grey to olive grey (3B2/E2) to black. On PDA attaining 34–37 mm diam after 14 d at 25 °C, yellow-grey to olive (3B2/F8), flat to radially folded, velvety to floccose, with regular margin; reverse dark green (30F8) to black. On SNA reaching 14–16 mm after 14 d at 25 °C, obverse and reverse white to olive (3A1/E3), flat, velvety to cottony, with regular margin. Mycelium superficial and immersed, composed of branched, septate, 2–5 μm wide, subhyaline hyphae with smooth or minutely verruculose and unthickened walls. Conidiophores erect, flexuous, geniculate and nodulose, septate, simple or branched, up to 140 μm long, 4–6 μm wide, pale to medium-brown, smooth to verruculose and thick-walled. Conidiogenous cells terminal, subcylindrical, nodulose, geniculate, 16–38 × 4–6 μm, thick-walled, bearing up to three conidiogenous loci of 2–3 μm diam, protuberant, darkened and refractive. Ramoconidia rarely formed, 0–2 septate, cylindrical, nodulose, 19–59 × 3–6 μm, pale brown, finely roughened. Conidia in branched chains, with up to three conidia in the terminal unbranched part, pale brown, echinulate, muricate to pustulate under SEM and thick-walled, with protuberant and not darkened conidial hila; small terminal conidia 0–1-septate, globose to subglobose, 5–7 × 4.5–6.5 μm (av. (± SD) 5.6 (± 0.7) × 5.3 (± 0.6)); intercalary conidia 0–1-septate, subglobose, obovoidal to ellipsoidal, 6–10 × 5–6.5 μm (av. (± SD) 8.9 (± 1.4) × 5.9 (± 0.6)); secondary ramoconidia 0–2-septate, sometimes constricted at septum, ellipsoidal to subcylindrical, often inflated at the apex, 8–27 × 4–7 μm (av. (± SD) 16.3 (± 5.6) × 5.0 (± 0.8)).

Cardinal temperature for growth — Optimum 25 °C, maximum 30 °C, minimum 15 °C.

Specimen examined. USA, Montana, from human sputum, Sept. 2007, D.A. Sutton (holotype CBS H-22329, culture ex-type CBS 140465 = UTHSC DI-13-257 = FMR 13370).

Notes — This species is phylogenetically related to C. angustiherbarum and C. variabile. However, C. angustiherbarum produces shorter and narrower conidiophores (up to 60 μm long and 4 μm wide) and does not form ramoconidia, while C. variabile produces multiseptate ramoconidia and long chains of broadly ellipsoidal conidia with a fine granulate ornamentation under SEM (De Vries 1952, Bensch et al. 2012). In C. subcinereum the ramoconidia are rarely formed and when present they are 0–2-septate, and its conidia are subglobose, obovoidal to ellipsoidal, exhibiting a much prominent muricate to pustulate ornamentation under SEM. Cladosporium herbaroides and C. herbarum are also morphologically similar to C. subcinereum, but they can be mainly differentiated by having larger/longer conidia (3–33 × (2–)3–6(–7) μm and 10–26(–35) × 2–3.5 μm respect to the two types of conidia described in C. herbaroides, and 4–10 × 3–5(–6) μm in C. herbarum) (Schubert et al. 2007, Bensch et al. 2012).

Cladosporium succulentum Sandoval-Denis, Deanna A. Sutton & Cano, sp. nov. — MycoBank MB814512; Fig. 9

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Cladosporium succulentum CBS 140466. a–c. Colonies on (a) PDA, (b) SNA and (c) OA after 14 d at 25 °C; d–e. conidiophores and chains of conidia; f. conidia. — Scale bars: a–c = 10 mm, d–f = 5 μm.

Etymology. From Latin succo ‘juice’ and ulentum ‘full of’, referring to the abundant production of exudates on PDA.

Colonies on OA reaching 23–25 mm after 14 d at 25 °C, dark green (30F3/F8), flat, granular to floccose, with fimbriate margin; reverse olive to dark green (3F8/30F4) turning black. On PDA attaining 28–35 mm diam after 14 d at 25 °C, olive brown (4F4/F8), flat, velvety to granular, with regular margin, producing abundant dark green exudates after 20–25 d; reverse black-blue (20F8) to black. On SNA reaching 27–32 mm after 14 d at 25 °C, obverse and reverse olive to olive brown (3E8/4E8), flat, downy to granular, with regular margin. Mycelium superficial and immersed, composed of septate, branched, 1.5–3.5 μm wide, subhyaline, smooth- and thin-walled hyphae. Conidiophores erect, straight or flexuous, septate, highly branched, up to 190 μm long, 2.5–4 μm wide, subhyaline, pale green-brown, smooth to finely roughened and thin-walled. Conidiogenous cells terminal and intercalary, cylindrical, 13–30 × 2–4 μm, thin-walled, bearing 2–6 conidiogenous loci of 1–2.5 μm diam, darkened and refractive. Ramoconidia 0–1-septate, cylindrical to subcylindrical, flexuous, 20–36 × 2–4 μm, pale green-brown, smooth to finely roughened. Conidia in branched chains, with up to six conidia in the terminal unbranched part, aseptate, pale green-brown, smooth- and thin-walled, with protuberant and darkened conidial hila; small terminal conidia oval to short clavate, 3–4 × 2–3 μm (av. (± SD) 3.6 (± 0.4) × 2.2 (± 0.4)), aseptate, with conspicuous and darkened conidial scars; intercalary conidia ovoid to limoniform, 4–6 × 2–3 μm (av. (± SD) 5.1 (± 0.6) × 2.3 (± 0.4)), with protuberant and not darkened conidial scars; secondary ramoconidia ellipsoidal to subcylindrical, 5–10 × 2–4.5 μm (av. (± SD) 8.2 (± 1.5) × 2.5 (± 0.4)).

Cardinal temperature for growth — Optimum 25 °C, maximum 35 °C, minimum 15 °C.

Specimen examined. USA, Florida, from a dolphin bronchus, July 2007, D.A. Sutton (holotype CBS H-22330, culture ex-type CBS 140466 = UTHSC DI-13-262 = FMR 13375).

Notes — Cladosporium succulentum is morphologically similar but genetically distant to C. halotolerans (98.4 %, 66.5 % and 79.8 % sequence similarity for ITS, tef1 and actA, respectively) and C. sphaerospermum (97.5 %, 72.7 % and 83.8 % sequence similarity for ITS, tef1 and actA, respectively). The latter two species can be differentiated from C. succulentum by having a maximum growth temperature at 30 °C (Zalar et al. 2007, Bensch et al. 2012) (35 °C in C. succulentum), and in the length and number of septa of their ramoconidia. In C. halotolerans and C. sphaerospermum these are 15–37 μm and (11.5–)20.5–40(–48) μm long, respectively, and they have up to five septa (Zalar et al. 2007, Bensch et al. 2012), while in C. succulentum the ramoconidia are 20–36 μm long with 0–1 septa. The phylogenetically closest species to C. succulentum are C. fusiforme and C. velox (sequence similarities less than 99.8 %, 80.7 % and 86.6 % for ITS, tef1 and actA, respectively), but the new species can be differentiated by the abundant production of ramoconidia and by its oval to short clavate terminal conidia. Ramoconidia in C. fusiforme and C. velox are rarely formed and their terminal conidia are obovoid to fusiform in the first species and globose to ovoid in the latter one (Zalar et al. 2007).

Cladosporium tuberosum Sandoval-Denis, Cano & Wiederhold, sp. nov. — MycoBank MB815339; Fig. 10

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Cladosporium tuberosum CBS 140693. a–c. Colonies on (a) PDA, (b) SNA and (c) OA after 14 d at 25 °C; d–f. conidiophores, conidiogenous cells and conidia. — Scale bars: a–c = 10 mm, d–f = 5 μm.

Etymology. From Latin tūberōsus ‘lumpy’ (full of protuberances), because of the nodulose shape of its conidiophores.

Colonies on OA reaching 23–26 mm after 14 d at 25 °C, olive brown (4D5/F7), flat, velvety to floccose, margin regular and with abundant submerged mycelium; reverse olive brown (4D5/F7) to black. On PDA attaining 44–50 mm diam after 14 d at 25 °C, dull green to dark green (30E4/F7), flat and radially folded, velvety to dusty, margin regular and white; reverse olive brown (4E8) to black. On SNA reaching 13–20 mm after 14 d at 25 °C, olive brown (4E4/F4), flat, velvety with cottony patches, margin irregular and with abundant submerged mycelium; reverse olive brown (4E4/F4) to black. Mycelium superficial and immersed, composed of septate, branched, 3–4.5 μm wide, subhyaline, smooth and thin-walled hyphae. Conidiophores erect, flexuous, cylindrical-oblong, nodulose, or bent once or several times being geniculate, laterally swollen, septate, unbranched or rarely laterally branched, up to 390 μm long, 5–6 μm wide, pale brown to olivaceous brown, smooth- and thick-walled. Conidiogenous cells terminal or intercalary, cylindrical or subnodulose, 15–38 × 4–5.5 μm, proliferating sympodially, forming lateral shoulders, bearing 1–2 conidiogenous loci at each shoulder, loci protuberant, 2–2.5 μm diam, darkened and refringent. Ramoconidia not observed. Conidia in branched chains, with up to three conidia in the terminal part, 0–1-septate, green-brown to yellow-brown, verrucose to echinulate and thick-walled with protuberant and darkened conidial hila; small terminal conidia oval, obovate or short ellipsoidal, 8–14 × 7–9 μm (av. (± SD) 13.1 (± 0.7) × 8.0 (± 0.8)); intercalary conidia ellipsoidal to limoniform, 11–16 × 7–10 μm (av. (± SD) 13.9 (± 1.7) × 8.5 (± 0.9)); secondary ramoconidia ellipsoidal to subcylindrical, 14–18 × 6–10 μm (av. (± SD) 16.1 (± 1.2) × 7.1 (± 1.3)).

Cardinal temperature for growth — Optimum 25 °C, maximum 30 °C, minimum 5 °C.

Specimens examined. USA, Florida, from human nasal biopsy, Dec. 2009, D.A. Sutton (holotype CBS H-22387, culture ex-type CBS 140693 = UTHSC DI-13-217 = FMR 13330); Washington, from human foot, Oct. 2009, D.A. Sutton, UTHSC DI-13-219 = FMR 13332.

Notes — This species is represented by two isolates of human clinical origin which cluster in a lineage clearly differentiated and together with C. basiinflatum group in a position basal to the remaining species of the C. herbarum complex (Fig. 1). Despite this basal position, it shows the typical morphological features of the species of the complex. Cladosporium tuberosum morphologically resembles C. sinuosum in the production of short conidial chains and the absence of ramoconidia (Schubert et al. 2007). However, in C. tuberosum the conidiophores are not as geniculate as in C. sinuosum and the conidia are always grouped forming short chains, while the conidia in C. sinuosum are often solitary although short chains can be also present (Bensch et al. 2015). In addition, C. tuberosum exhibits a faster growth rate on PDA, forming colonies almost black at the obverse rather than the olivaceous grey to pale olivaceous grey colonies of C. sinuosum (Bensch et al. 2015).

Cladosporium xantochromaticum Sandoval-Denis, Gené & Cano, sp. nov. — MycoBank MB815340; Fig. 11

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Cladosporium xantochromaticum CBS 140691. a–c. Colonies on (a) PDA, (b) SNA and (c) OA after 14 d at 25 °C; d–f. conidiophores and chains of conidia. — Scale bars: a–c = 10 mm, d–f = 5 μm.

Etymology. From Greek xanthós (ξανθóζ) ‘yellow’ and khrôma (χρ[omega with tilde]μα) ‘colour’, referring to the production of a yellow diffusible pigment on PDA.

Colonies on OA reaching 40–50 mm after 14 d at 25 °C, obverse and reverse olive brown to grey-green (4F8/30E7), flat, granular, radiate, margin regular and with abundant submerged mycelium; diffusible pigment absent. On PDA attaining 60–67 mm diam after 14 d at 25 °C, olive brown (4E8/F8), flat or folded at centre, dusty or granular, velvety toward the periphery, margin regular, white to yellow, and with abundant submerged mycelium; reverse black, with a light yellow to grey-yellow (2A5/B5) diffusible pigment. On SNA reaching 35–37 mm after 14 d at 25 °C, olive brown (4E5/E8), flat, velvety to granular, radiate, margin regular and with abundant submerged mycelium; reverse olive brown (4E5/E8) to black, without diffusible pigment. Mycelium superficial and immersed, composed of septate, branched, 1.5–3 μm wide, pale brown, smooth and thin-walled hyphae. Conidiophores erect, flexuous, cylindrical, non-nodulose, septate, simple or branched typically immediately before a septum, up to 210 μm long, 2–4 μm wide, pale brown, smooth and thin-walled. Conidiogenous cells terminal, cylindrical, sometimes geniculate, 12–32 × 3–4 μm, bearing up to three conidiogenous loci of 1–1.5 μm diam, darkened and refringent. Ramoconidia aseptate, subcylindrical to cylindrical, 18–36 × 2–3.5 μm, pale brown, smooth or finely roughened. Conidia forming branched chains, with up to four conidia in the terminal unbranched part, pale green-brown, smooth- and thin-walled, with protuberant, not darkened conidial hila; small terminal conidia aseptate, obovate to short ellipsoidal 4–5 × 2–2.5 μm (av. (± SD) 4.3 (± 0.3) × 2.2 (± 0.2)); intercalary conidia aseptate, ellipsoidal to limoniform, 5–7 × 2.5–3.5 μm (av. (± SD) 5.8 (± 0.6) × 2.6 (± 0.3)); secondary ramoconidia 0–1-septate, subcylindrical, sometimes slightly constricted at the centre, 10–28 × 3–4 μm (av. (± SD) 15.7 (± 5.2) × 3.3 (± 0.4)).

Cardinal temperature for growth — Optimum 20 °C, maximum 30 °C, minimum 5 °C.

Specimen examined. USA, Texas, from human bronchoalveolar lavage fluid, Sept. 2010, D.A. Sutton (holotype CBS H-22388, culture ex-type CBS 140691 = UTHSC DI-13-211 = FMR 13324).

Notes — This species belongs to the C. cladosporioides species complex and clusters with C. angulosum and C. perangustum, forming a basal lineage characterised by narrow conidia and slightly roughened conidiophores and conidia. Bensch et al. (2012) considered C. perangustum a species with considerable genetic variability but morphologically uniform. The new species, however, is genetically (99.1 %, 75 % and 89.1 % sequence similarity for ITS, tef1 and actA, respectively) and phenotypically well differentiated from C. perangustum. Cladosporium xantochromaticum has smaller ramoconidia (18–36 × 2–3.5 μm) and smooth-walled conidiophores, while in C. perangustum the ramoconidia are 25–45 × 2.5–3(–4.5) μm and the conidiophores are more or less rough-walled especially towards the base, asperulate-verruculose, and smooth to almost so at the apex (Bensch et al. 2010).

DISCUSSION

The genus Cladosporium has been extensively reviewed in recent years in efforts to clarify the phylogeny and taxonomic structure of its species and allied fungi, and has resulted in a modern redefinition of the genus (Crous et al. 2007a, b, Schubert et al. 2007, Zalar et al. 2007, Bensch et al. 2010, 2012, 2015). However, until recently, no attempt had been made to study the impact of these new approaches in the diversity of Cladosporium species of clinical interest.

In a previous study, we demonstrated that the species diversity of Cladosporium associated to clinical samples was underestimated (Sandoval-Denis et al. 2015). Furthermore, we found that species traditionally considered clinically relevant, identified by phenotypic criteria alone, were among the least represented. In fact, several morphologically similar sibling species were found to be more prevalent, including putative new taxa (De Hoog et al. 2011, Sandoval-Denis et al. 2015). Those previously undescribed lineages are characterised here using both molecular and phenotypic criteria and resulting in the proposal of 10 new Cladosporium species. Sampling for this study was limited to isolates from the USA, and a wider sampling area is expected to provide a more precise reflection of the real distribution of these new species around the world.

The new species proposed here have been mostly isolated from human respiratory samples, which might be explained by the fact that Cladosporium conidia are easily dispersed by air (David 1997). However, the clinical relevance of the species of this genus, at least to produce invasive disease, has been questioned by their inability to grow at 37 °C (De Hoog et al. 2011, Sandoval-Denis et al. 2015), which was also confirmed with the new species. Nevertheless, despite the large number of species involved in this study, some of them were represented by numerous isolates, such as C. anthropophilum, which could be linked to a certain degree of specialisation towards colonisation of the human respiratory tract.

Within a given species complex, the different species of Cladosporium are often difficult to identify from morphological characters alone. However, some key differential features have been identified and have been detailed in a series of monographic papers (Schubert et al. 2007, Zalar et al. 2007, Bensch et al. 2012). We have followed the criteria from those papers in order to distinguish potentially new species from their closest phylogenetic and morphological relatives. As is usual in this genus, no sexual morphs were observed in any of them. In fact, sexual structures have been observed in vitro in only eight accepted species of Cladosporium (Bensch et al. 2012). Among the species described here, the most relevant differential morphological traits were the presence of ramoconidia, the length, complexity and ornamentation of the conidiophores, intercalary and terminal conidia. However, given the overlapping of these features, and the need for standardisation using special culture media and scanning electron microscopy procedures, the use of a molecular approach should be mandatory for correct identification of the species in this complex fungal group. With these studies, we have considerably expanded the list of Cladosporium species as potential human opportunistic fungi, which makes their identification difficult given their high morphological similarity (De Hoog et al. 2015). That said, distinguishing morphologically similar species of Cladosporium seems not to be as relevant from a clinical perspective because the in vitro antifungal response does not differ considerably between species of the same species complex (Sandoval-Denis et al. 2015). In contrast, in vitro antifungal susceptibilities do differ between species complexes, with the C. sphaerospermum complex showing higher inhibitory concentrations against amphotericin B, azoles and caspofungin (Sandoval-Denis et al. 2015).

Our phylogenetic studies agree with previous revisions of the genus (Schubert et al. 2007, Zalar et al. 2007, Bensch et al. 2012). The most phylogenetic informative markers were actA and tef1, while ITS sequences were usually identical for species of the same complex as previously reported by Bensch et al. (2010). Although most of the taxa in the present study are consistently separated in terms of their genetic and morphological differences, a high genetic variability was observed in the clades representing the new species C. anthropophilum and C. tuberosum, as well in clades representing well-known species, i.e. C. allicinum, C. perangustum, C. pseudocladosporioides, C. sinuosum and C. tenuissimum. This might indicate an ongoing process of active divergence and speciation as it has been described for other fungi, which demands further study (Gao et al. 2015).

Several studies have shown a higher number of species in the C. cladosporioides complex (Bensch et al. 2010, 2012, 2015) and our results agree with them. Of the taxa that were newly described here, six species belonged to the C. cladosporioides complex, whereas only three and one, belonged to the C. herbarum and C. sphaerospermum species complexes, respectively. The C. cladosporioides complex is phylogenetically well defined and includes a large group of species characterised by unbranched or branched, almost cylindrical conidiophores, bearing ovoid to ellipsoidal intercalary and terminal conidia, smooth or rarely showing a fine ornamentation (Bensch et al. 2012). Although most of the known species of this complex do not tolerate high temperatures, our results showed that in the C. cladosporioides complex at least three of the new species (C. angulosum, C. anthropophilum and C. flavovirens), as well as several isolates identified as C. pseudocladosporioides are able to grow at 35 °C, which might explain their relatively high rate of isolation from homoeothermic hosts.

The C. herbarum species complex is also phylogenetically and morphologically well defined and contains a less diverse group of species characterized by nodulose conidiophores, bearing distinctly ornamented, globose to subglobose terminal conidia (Schubert et al. 2007). It is interesting that none of the new species of this complex were able to grow at temperatures higher than 30 °C. In contrast, the only new species described in the C. sphaerospermum complex was able to growth and sporulate, although poorly, at 35 °C. The members of the C. sphaerospermum species complex are morphologically homogeneous, characterised by conidiophores that are usually branched and lacking nodose inflations, producing both smooth-walled and ornamented conidia (Zalar et al. 2007). Most species currently included in this group exhibit a high degree of osmotic tolerance, but are unable to grow at temperatures exceeding 30 °C (Zalar et al. 2007, Bensch et al. 2012). However, it has been suggested previously that this complex does not represent a monophyletic group, but most likely represents various species complexes instead (Bensch et al. 2012). This was also suggested by our phylogenetic results which revealed that the species currently included in the C. sphaerospermum complex consistently grouped together as a polyphyletic arrangement in both combined and individual analyses, forming at least five different lineages with high statistical support and important genetic differences. The new species C. succulentum grouped in a lineage with C. aciculare, C. fusiforme, C. longissimum, C. sphaerospermum and C. velox. However, as previously described, there are no phenotypic differences to discriminate among these closely related taxa that would warrant the establishment of additional species complexes to accommodate these lineages (Zalar et al. 2007, Bensch et al. 2015).

In this study, the analysis of isolates from human and animal clinical specimens has allowed us to considerably increase the known diversity of species for the genus, expanding substantially the spectrum of species of potential clinical interest. Further studies are needed to fully understand the ecology and importance of these new species in the aetiology of infections in warm-blooded hosts.

Acknowledgments

This study was supported by the Spanish Ministerio de Economía y Competitividad, grants CGL 2011-27185 and CGL2013-43789-P.

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